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CHAPTER 6

LITERATURE CITED

Adaptive Management Forum Scientific and Technical Panel. 2002. Merced River Adaptive Management Forum Report. Report prepared for the Central Valley Project Improvement Act Anadromous Fish Restoration Program and the CALFED Bay-Delta Program. 19 July, 2002. University of California, Davis.

Arkoosh, M.R., E. Casillas, P. Huffman, E. Clemons, J. Evered, J.E. Stein, and U. Varanasi. 1998. Increased susceptibility of juvenile chinook salmon from a contaminated estuary to Vibrio anguillarum. Trans Am Fish Soc 127:360-374.

Barnhart, R.A. 1991. Steelhead (Oncorhynchus mykiss). In: Stolz, J. and J. Schnell, editors, Trout, The Wildlife Series. Stackpole Books. Harrisburg, PA. 370 pp.

Brandes, P.L. and J.S. McLain. 2001. Juvenile Chinook salmon abundance, distribution, and survival in the Sacramento-San Joaquin Estuary. In: Brown, R.L., editor. Fish Bulletin 179: Contributions to the biology of Central Valley salmonids. Volume 2. Sacramento (CA): California Department of Fish and Game. Pages 39-138.

Boydstun, L.B. 2001. Ocean Salmon Fishery Management. In: Brown, R.L., editor. Fish Bulletin 179: Contributions to the biology of Central Valley salmonids. Volume 2. Sacramento (CA): California Department of Fish and Game. Pages 183-195.

Brett, J.R., W.C. Clarke, and J.E. Shelbourn. 1982. Experiments on thermal requirements for growth and food conversion efficiency of juvenile Chinook salmon, Oncorhynchus tshawytscha. Canadian Technical Report Fisheries and Aquatic Sciences 1127:29 p.

Brown L. 1996. Aquatic biology of the San Joaquin-Tulare basins, California: analysis of available data through 1992. Report prepared in cooperation with the National Water-Quality Assessment Program by the U.S. Geological Survey. Water Supply Paper 2471.

Brown, L.R., and P.B. Moyle. 1981. The impact of squawfish on salmonid populations: a review. N. American J. Fish. Manage. 1:104-111.

California Bureau of Marine Fisheries. 1949. The Commercial Fish Catch of California for the year 1947 with an Historical Review 1916-47. California Division of Fish and Game, Fish Bulletin 74: 1-223.

[CDF&G] California Department of Fish and Game. 1972. Report to the California State Water Resources Control Board on effects of the New Melones Project on fish and wildlife resources of the Stanislaus River and Sacramento-San Joaquin Delta. Produced by Region 4, Anadromous Fisheries Branch, Bay-Delta Research Study, and Environmental Services Branch.

[CDF&G] California Department of Fish and Game. 1991 to 1998. Annual Reports, Fiscal Years 1987-1997, San Joaquin River Chinook Salmon Enhancement Project. Sport Fish Restoration Act, Project F-51-R-4, Sub Project Number IX, Study Number 5, Jobs 1 through 7. Region 4, Fresno.

[CDFG] California Department of Fish and Game. 1998. Report to the Fish and Game Commission: a status review of the spring-run Chinook salmon (Oncorhynchus tshawytscha) in the Sacramento River Drainage. Candidate Species Status Report 98-01. June 1998.

[CMC] Carl Mesick Consultants, Aquatic Systems Research, and Thomas R. Payne & Associates. 1996. Spawning habitat limitations for fall-run Chinook salmon in the Stanislaus River between Goodwin Dam and Riverbank. Review draft report prepared for Neumiller & Beardslee and the Stockton East Water District. 1 July 1996.

[CMC] Carl Mesick Consultants. 1997. A fall 1996 study of spawning habitat limitations for fall-run Chinook salmon in the Stanislaus River between Goodwin Dam and Riverbank. Review draft report prepared for Neumiller & Beardslee and the Stockton East Water District. 3 June 1997.

[CMC] Carl Mesick Consultants. 2001. Task 3 pre-project evaluation report, Knights Ferry Gravel Replenishment Project. Final report produced for the CALFED Bay Delta Program and the Stockton East Water District. Revised 20 July 2001, El Dorado, California.

[CMC] Carl Mesick Consultants. 2002a. Task 5 initial post-project evaluation report, fall 2000, Knights Ferry Gravel Replenishment Project. Final report produced for the CALFED Bay Delta Program and the Stockton East Water District. 14 January 2002, El Dorado, California.

[CMC] Carl Mesick Consultants. 2002b. Task 6 second year post-project evaluation report, fall 2000, Knights Ferry Gravel Replenishment Project. Final report produced for the CALFED Bay Delta Program and the Stockton East Water District. 20 February 2002, El Dorado, California.

[CMC] Carl Mesick Consultants. 2002c. Gravel mining and scour of salmonid spawning habitat in the lower Stanislaus River. Report produced for the Stanislaus Fish Group. 10 May 2002, El Dorado, California.

Clark, G.H. 1929. Sacramento-San Joaquin Salmon (Oncorhynchus tschawytscha) Fishery of California. Division of Fish and Game of California, Fish Bulletin No. 17:1-73.

Curet, T.S. 1993. Habitat use, food habits and the influence of predation on subyearling chinook salmon in Lower Granite and Little Goose reservoirs, Washington. Master's thesis. University of Idaho, Moscow.

Demko D.B., C. Gemperle, S.P. Cramer, and A. Phillips. 1999. Outmigrant trapping of juvenile salmonids in the lower Stanislaus River Caswell State Park site 1998. Report prepared for the U.S. Fish and Wildlife Service, Anadromous Fish Restoration Program under contract with CH2M Hill. Sacramento, California.

Demko, D.B., C. Gemperle, A. Phillips, and S.P. Cramer. 2000. Outmigrant trapping of juvenile salmonids in the lower Stanislaus River Caswell State Park Site 1999. Report prepared by S.P. Cramer & Associates for the U.S. Fish and Wildlife Service under subcontract to CH2M Hill. September 2000. Gresham, Oregon.

[DWR] California Department of Water Resources. 1994. San Joaquin River tributaries spawning gravel assessment: Stanislaus, Tuolumne, Merced rivers. Draft memorandum prepared by the Department of Water Resources, Northern District, for the California Department of Fish and Game. Contract number DWR 165037.

[EA] EA Engineering, Science, and Technology. 1992. Lower Tuolumne River Predation Study Report in Appendix 22, Report of Turlock Irrigation District and Modesto Irrigation District Pursuant to Article 39 of the License for the Don Pedro Project. Report prepared for the Turlock Irrigation District and the Modesto Irrigation District.

Fisheries Foundation. 2002. Stanislaus River anadromous fish surveys 2000-2001. Draft report produced for the U.S. Fish and Wildlife Service, Sacramento. April 2002.

Fry, D.H., Jr. 1961. King salmon spawning stocks of the California Central Valley, 1940-1959. California Fish and Game 47(1):55-71.

Goodbred S.L., R.J. Gilliom, T.S. Gross, N.P. Denslow, W.L. Bryant, and T.R. Schoeb. 1997. Reconnaissance of 17B-estradiol, 11-ketotestosterone, vitellogenin, and gonad histopathology in common carp of United States streams: Potential for contaminant-induced endocrine disruption. Sacramento, California: U.S. Geological Survey Open-File Report 96-627.

Hallock R.J., R.F. Elwell, and D.H. Fry, Jr. 1970. Migrations of adult king salmon Oncorhynchus tshawytscha in the San Joaquin Delta; as demonstrated by the use of sonic tags. California Department of Fish and Game, Fish Bulletin 151.

Hare S.R. and R.C. Francis. 1995. Climate change and salmon production in the northeast Pacific Ocean. In: Beamish RJ, editor. Climate change and northern fish populations. Can Spec Publ Fish Aquat Sci 121. p 357-372.

Hare S.R., N.J. Mantua, and R.C. Francis. 1999. Inverse production regimes: Alaska and West Coast Pacific salmon. Fisheries 24(1):6-14.

Herren, J.R. and S.S. Kawasaki. 2001. Inventory of water diversions in four geographic areas in California's Central Valley. In: Brown, R.L., editor. Fish Bulletin 179: Contributions to the biology of Central Valley salmonids. Volume 2. Sacramento (CA): California Department of Fish and Game. Pages 343-355.

Kondolf, G.M., A. Falzone, and K.S. Schneider. 2001. Reconnaissance-level assessment of channel change and spawning habitat on the Stanislaus River below Goodwin Dam. Report to the U.S. Fish and Wildlife Service, Sacramento, CA. 22 March 2001.

Loudermilk, W.E. 1996. Fall-run chinook salmon egg deposition and exposure to lethal water temperatures in the designated salmon spawning area of the lower Stanislaus River. DFG Exhibit 96-6 submitted to the State Water Resources Control Board by the Department of Fish and Game in January 1996 regarding water Right change petitions filed by Calaveras County Water District.

MacCall A, Kremer P, Graham W, Haney R, Hollowed A, Mackas D, Ohman M, Powell T, Rau G, Rice J, Schumacher J, Shapiro L, Smith P, Welling L, and Woehler E. 1992. Major shifts in species composition and ecosystem structure. Working Group Report in Global Ocean Ecosystems Dynamics and Climate Change (GLOBEC). Eastern Boundary Current Program Report on Climate Change and the California Current Ecosystem. Report Number 7. Workshop held 17-20 September 1992 at Bodega Marine Laboratory of the University of California.

MacFarlane, B. 1999. Physiological ecology of juvenile chinook salmon in the San Francisco Estuary and Gulf of the Farallones. Presentation at the Interagency Ecological Program Annual Workshop, 26 February 1999, Asilomar Conference Center, Pacific Grove, California.

MacFarlane, R.B. and E.C. Norton. 2002. Physiological ecology of juvenile Chinook salmon (Oncorhynchus tshawytscha) at the southern end of their distribution, the San Francisco Estuary and Gulf of the Farallones, California. Fish. Bull. 100:244-257.

Mantua NJ, SR Hare, Y Zhang, JM Wallace, and RC Francis. 1997. A Pacific interdecadal climate oscillation with impacts on salmon production. Bulletin of the American Meteorological Society 78:1069-1079.

McCarty, P.L. 1969. An evaluation of algal decomposition in the San Joaquin Estuary. Report prepared for the Federal Water Pollution Control Administration under Research Grant DI-16010 DL. Stanford (CA): Stanford University.

McEwan, D.R. 2001. Central Valley Steelhead. In: Brown, R.L., editor. Fish Bulletin 179: Contributions to the biology of Central Valley salmonids. Volume 1. Sacramento (CA): California Department of Fish and Game. Pages 1-44.

Mesick, C.F. 2001a. Factors that potentially limit the populations of fall-run Chinook salmon in the San Joaquin tributaries. Presentation and report to the Stanislaus Fish Group, Stockton, California. Carl Mesick Consultants, El Dorado, California. 21 August 2001.

Mesick, C.F. 2001b. Studies of spawning habitat for fall-run Chinook salmon in the Stanislaus River between Goodwin Dam and Riverbank from 1994 to 1997. In: Brown, R.L., editor. Fish Bulletin 179: Contributions to the biology of Central Valley salmonids. Volume 2. Sacramento (CA): California Department of Fish and Game. Pages 217-252.

Mesick, C.F. 2001c. The effects of San Joaquin River flows and Delta export rates during October on the number of adult San Joaquin Chinook salmon that stray. In: Brown, R.L., editor. Fish Bulletin 179: Contributions to the biology of Central Valley salmonids. Volume 2. Sacramento (CA): California Department of Fish and Game. Pages 139-161.

[NMFS] National Marine Fisheries Service. 2002. Biological opinion for the Central Valley Project (CVP) and State Water Project (SWP) operations, April 1, 2002 through ?. Section 7 Consultation by NMFS, Southwest Region with U.S. Bureau of Reclamation, Mid-Pacific Region, Sacramento, California.

Pickard, A., A. Grover, and F.A. Hall, Jr. 1982. An evaluation of predator composition at three locations on the Sacramento River. Interagency Ecological Study Program for the Sacramento-San Joaquin Estuary. Technical Report 2.

Reisenbichler RR. 1986. Use of spawner-recruit relations to evaluate the effect of degraded environment and increasing fishing on the abundance of fall-run chinook salmon (Oncorhynchus tshawytscha) in several California streams [Ph.D. dissertation]. Seattle (WA): University of Washington. 175 p.

Rich, A.A. 1987. Report on studies conducted by Sacramento County to determine the temperatures which optimize growth and survival in juvenile Chinook salmon (Oncorhynchus tshawytscha). Prepared for McDonough, Holland and Allen, Sacramento, California. April 1987. 52 pp & Appendices.

Rich, A.A. and W.E. Loudermilk. 1991. Preliminary evaluation of Chinook salmon smolt quality in the San Joaquin Drainage. Report produced by the California Department of Fish and Game, Region 4, Fresno, California. 18 February 1991.

Saiki M.K., M.R. Jennings, and R.H. Wiedmeyer. 1992. Toxicity of agricultural subsurface drainwater from the San Joaquin Valley, California, to juvenile chinook salmon and striped bass. Trans Am Fish Soc 121:78-93.

[SJRGA] San Joaquin River Group Authority. 2001. 2000 Annual Technical Report on Implementation and Monitoring of the San Joaquin River Agreement and the Vernalis Adaptive Management Plan. Report prepared for the California State Water Resources Control Board. Sacramento, CA. January 2001.

[SJRGA] San Joaquin River Group Authority. 2002. 2001 Annual Technical Report on Implementation and Monitoring of the San Joaquin River Agreement and the Vernalis Adaptive Management Plan. Report prepared for the California State Water Resources Control Board. Sacramento, CA. January 2002.

Schneider, K. 1999. Channel adjustments downstream of Goodwin Dam, Stanislaus River: An examination of river morphology and hydrology from 1996-1999. Report prepared for LA 227: Restoration of Rivers and Streams, Professor G. Mathias Kondolf, U.C. Berkeley, December 15, 1999.

Sommer, T.R., M.L. Nobriga, W.C. Harrell, W. Batham, and W.J. Kimmerer. 2001. Floodplain rearing of juvenile chinook salmon: evidence of enhanced growth and survival. Can. J. Fish. Aquat. Sci. 58:325-333.

S.P. Cramer and Associates, Inc. 1998. Evaluation of juvenile Chinook behavior, migration rate and location of mortality in the Stanislaus River through the use of radio tracking. Report prepared for Tri-dam Project. December 1998, Gresham, Oregon.

S.P. Cramer and Associates, Inc. 2001. 2001 Stanislaus River Data Report. Final Data Report, S.P. Cramer & Associates, Gresham, Oregon.

Tabor, R.A., R.S. Shively, and T.P. Poe. 1993. Predation on juvenile salmonids by smallmouth bass and northern squawfish in the Columbia River near Richland, Washington. North American J. Fish. Manage. 13:831-838.

[USBOR] U.S. Bureau of Reclamation. 1993. Stanislaus River Basin Model. Draft report produced by J.H. Rowell, Mid-Pacific Region, Sacramento, California.

[USFWS] U.S. Fish and Wildlife Service. 1993. The relationship between instream flow and physical habitat availability for chinook salmon in the Stanislaus River, U.S. Fish and Wildlife Service, Sacramento, California. May 1993.

[USFWS] U.S. Fish and Wildlife Service. 1995. Stanislaus River Basin and Calaveras River Water Use Program, HEP Team Report. Report prepared by the U.S. Fish and Wildlife Service, Division of Ecological Services, Sacramento, California. This report is an appendix to the U.S. Bureau of Reclamation, American River/Folsom South Conjunctive Use Optimization Study Transition Report, produced in March 1996 by the Mid-Pacific Region, Sacramento, California office.

Ward, D.L., J.H. Petersen, and J.J. Loch. 1995. Index of predation on juvenile salmonids by northern squawfish in the lower and middle Columbia River and in the lower Snake River. Transactions of the American Fisheries Society 124:321-334.

Yoshiyama, R.M., E.R. Gerstung, F.W. Fisher, P.B. Moyle. 1996. Historical and present distribution of Chinook salmon in the Central Valley drainage of California. Sierra Nevada Ecosystem Project: Final report to Congress, vol. III, Assessments, Commissioned Reports, and Background Information. Davis: University of California, Centers for Water and Wildland Resources.

Yoshiyama, R.M., E.R. Gerstung, F.W. Fisher, P.B. Moyle. 1998. Chinook salmon and steelhead in the California Central Valley: an assessment. Manuscript submitted to the American Fisheries Society for publication in Fisheries. 1 October 1998.

Zimmerman, M.P. 1999. Food habits of smallmouth bass, walleyes, and northern pikeminnow in the Lower Columbia River basin during outmigration of juvenile anadromous salmonids. Transactions of the American Fisheries Society 128:1036-1054.

NOTES:

Frymire, P. 2000. Long-term resident of the Stanislaus River corridor, Frymire Road, Knights Ferry, California. Personal communication with Carl Mesick, March 2000.

Mesick, C.F. Poster at Indian Grinding Rock State Historic Park, 14881 Pine Grove-Volcano Road, Pine Grove, California. The poster was observed in 1995 but it has since been removed.

Mitchell, B. Fishery biologist with Jones and Stokes, Sacramento, California.

Van Nieuwenhuyse, E. U.S. Fish and Wildlife Service, Habitat Restoration Coordinator, Stockton California, August 1998. Currently with the U.S. Bureau of Reclamation, Sacramento, California.

Vogel D. 2000. Natural Resource Scientists, fishery biologist and owner, Red Bluff, California. Personal communication via email with the author on 5 September 2000.

Walser, S.B. Executive Director of California Rivers Restoration Fund and owner/professional fishing guide for Sierra West Adventures, Sonora, California.

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